Natrix: a Snakemake-based workflow for processing, clustering, and taxonomically assigning amplicon sequencing reads
نویسندگان
چکیده
منابع مشابه
From sequencing reads to microbial Diversity: bioinformatic Algorithms for Processing amplicon sequencing Data
has revolutionized the field of microbial ecology by offering a cost-efficient method to assess microbial diversity at an unseen depth using 16S rRNA amplicon sequencing approaches. Different preprocessing algorithms need to be performed to obtain a collection of highly reliable sequencing reads, ending with a clustering step to group them into Operational Taxonomic Units (OTUs) However, this a...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2020
ISSN: 1471-2105
DOI: 10.1186/s12859-020-03852-4